# link DockEM suite of programs for linux platforms
# gfortram

# 5 programs

#1. DockEMv2
#2. DockEM2Xpeaks
#3. DockXsoln2
#4. Makedensity2
#5. Mapfilter2



#change the environment variable IMAGE_PUBLIC for your system,
#
# or for convenience current MRC image libraries are in the local 
# subdirectories,
# so you need not change anything. 
#

#setenv IMAGE_PUBLIC MRCIMAGELIBS
#setenv IMAGE_PUBLIC /s/image2010  # on Octavia
#setenv IMAGE_PUBLIC /home/roseman/Desktop/Octavia-bak2k9aug/public/image2000/image2000/

setenv IMAGE_PUBLIC  ../../../devtools/builddir/ccpem/src/image2010   # for ccpem distro



setenv IMAGELIB $IMAGE_PUBLIC/lib
setenv IMAGEBIN $IMAGE_PUBLIC/bin
setenv IMAGESOURCE $IMAGE_PUBLIC/source

gfortran -c   -w -o MRC3DFOURIER.a ./source/MRC3DFOURIER.for

gfortran -c  -w -o DockEMlibV2.03.a ./source/DockEMlibV2.03.f90




gfortran -fbounds-check   -o DockEM2-LSV2.0  ./source/DockEM2-LocalSearchV2.0.f90 \
${IMAGELIB}/libimlib2010.a \
${IMAGELIB}/libgenlib.a \
${IMAGELIB}/libmisclib.a \
./MRC3DFOURIER.a \
./DockEMlibV2.03.a 

gfortran  -fbounds-check -w -o Makedensity2  ./source/MakedensityV2.40.f90 \
${IMAGELIB}/libimlib2010.a \
${IMAGELIB}/libgenlib.a \
${IMAGELIB}/libmisclib.a \
./MRC3DFOURIER.a \
./DockEMlibV2.03.a 


gfortran -fbounds-check  -w   -o Mapfilter2  ./source/MapfilterDKM2p0.f90 \
${IMAGELIB}/libimlib2010.a \
${IMAGELIB}/libgenlib.a \
${IMAGELIB}/libmisclib.a \
./MRC3DFOURIER.a \
./DockEMlibV2.03.a 

gfortran -fbounds-check  -w   -o MaskConvolute  ./source/MaskConvoluteDKM2p0.f90 \
${IMAGELIB}/libimlib2010.a \
${IMAGELIB}/libgenlib.a \
${IMAGELIB}/libmisclib.a \
./MRC3DFOURIER.a \
./DockEMlibV2.03.a 


gfortran -fbounds-check  -w   -o DockEM2XpeaksM  ./source/DockEM2XpeaksMV2.03.f90 \
${IMAGELIB}/libimlib2010.a \
${IMAGELIB}/libgenlib.a \
${IMAGELIB}/libmisclib.a \
./MRC3DFOURIER.a \
./DockEMlibV2.03.a 

gfortran -fbounds-check  -w   -o DockEM2Xpeaks  ./source/DockEM2XpeaksV2.06.f90 \
${IMAGELIB}/libimlib2010.a \
${IMAGELIB}/libgenlib.a \
${IMAGELIB}/libmisclib.a \
./MRC3DFOURIER.a \
./DockEMlibV2.03.a 


gfortran -fbounds-check  -w   -o DockEM2Xsoln2  ./source/DockXsolnV2.03.f90 \
${IMAGELIB}/libimlib2010.a \
${IMAGELIB}/libgenlib.a \
${IMAGELIB}/libmisclib.a \
./MRC3DFOURIER.a \
./DockEMlibV2.03.a
