# link DockEM suite of programs for linux platforms
# gfortram

# 5 programs

#1. DockEMv2
#2. DockEM2Xpeaks
#3. DockXsoln2
#4. Makedensity2
#5. Mapfilter2



#change the environment variable IMAGE_PUBLIC for your system,
#
# or for convenience current MRC image libraries are in the local 
# subdirectories,
# so you need not change anything. 
#

#setenv IMAGE_PUBLIC MRCIMAGELIBS
#setenv IMAGE_PUBLIC /s/image2010  # on Octavia
#setenv IMAGE_PUBLIC /home/roseman/Desktop/Octavia-bak2k9aug/public/image2000/image2000/

#setenv IMAGE_PUBLIC  ../../../devtools/builddir/ccpem/src/image2010   # for ccpem distro


setenv IMAGE_PUBLIC /s/ccpem/CCPEM

setenv IMAGELIB $IMAGE_PUBLIC/lib
setenv IMAGEBIN $IMAGE_PUBLIC/bin
setenv IMAGESOURCE $IMAGE_PUBLIC/ext

gfortran -c   -w -o MRC3DFOURIER.a ./ext/MRC3DFOURIER.for

gfortran -c  -w -o DockEMlibV2.03.a ./ext/DockEMlibV2.03.f90



 
gfortran -fbounds-check   -o DockEM2-LSV2.0  ./ext/DockEM2-LocalSearchV2.f90 \
${IMAGELIB}/libimlib2010.a \
${IMAGELIB}/libgenlib.a \
${IMAGELIB}/libmisclib.a \
./MRC3DFOURIER.a \
./DockEMlibV2.03.a 

gfortran -fbounds-check   -o DockEM2-LSV2pll  ./ext/DockEM2-LocalSearchV2_pll.f90 \
${IMAGELIB}/libimlib2010.a \
${IMAGELIB}/libgenlib.a \
${IMAGELIB}/libmisclib.a \
./MRC3DFOURIER.a \
./DockEMlibV2.03.a 


gfortran -fbounds-check   -o DockEM2-LSV2pll_merge  ./ext/DockEM2-LocalSearchV2_pll_merge.f90 \
${IMAGELIB}/libimlib2010.a \
${IMAGELIB}/libgenlib.a \
${IMAGELIB}/libmisclib.a \
./MRC3DFOURIER.a \
./DockEMlibV2.03.a 



gfortran  -fbounds-check -w -o Makedensity2  ./ext/MakedensityV2.f90 \
${IMAGELIB}/libimlib2010.a \
${IMAGELIB}/libgenlib.a \
${IMAGELIB}/libmisclib.a \
./MRC3DFOURIER.a \
./DockEMlibV2.03.a 


gfortran -fbounds-check  -w   -o Mapfilter2  ./ext/MapfilterDKM2.f90 \
${IMAGELIB}/libimlib2010.a \
${IMAGELIB}/libgenlib.a \
${IMAGELIB}/libmisclib.a \
./MRC3DFOURIER.a \
./DockEMlibV2.03.a 

gfortran -fbounds-check  -w   -o MaskConvolute  ./ext/MaskConvoluteDKM2.f90 \
${IMAGELIB}/libimlib2010.a \
${IMAGELIB}/libgenlib.a \
${IMAGELIB}/libmisclib.a \
./MRC3DFOURIER.a \
./DockEMlibV2.03.a 


gfortran -fbounds-check  -w   -o DockEM2XpeaksM  ./ext/DockEM2XpeaksMV2.03.f90 \
${IMAGELIB}/libimlib2010.a \
${IMAGELIB}/libgenlib.a \
${IMAGELIB}/libmisclib.a \
./MRC3DFOURIER.a \
./DockEMlibV2.03.a 

gfortran -fbounds-check  -w   -o DockEM2Xpeaks  ./ext/DockEM2XpeaksV2.f90 \
${IMAGELIB}/libimlib2010.a \
${IMAGELIB}/libgenlib.a \
${IMAGELIB}/libmisclib.a \
./MRC3DFOURIER.a \
./DockEMlibV2.03.a 


gfortran -fbounds-check  -w   -o DockEM2Xsoln2  ./ext/DockXsolnV2.f90 \
${IMAGELIB}/libimlib2010.a \
${IMAGELIB}/libgenlib.a \
${IMAGELIB}/libmisclib.a \
./MRC3DFOURIER.a \
./DockEMlibV2.03.a
